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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs201659904 chr8:71610255 C/A XKR9 chr8:71581600-71702606:+ 0.74 6.89 7.51E-9 Box Plot
ACC rs201675706 chr2:99766247 T/TC TSGA10 chr2:99613724-99771427:- 0.57 5.56 9.38E-7 Box Plot
ACC rs2017544 chr7:76039448 T/C UPK3B chr7:76139745-76145838:+ 0.71 5.85 3.35E-7 Box Plot
ACC rs201801376 chr8:71691179 C/T XKR9 chr8:71581600-71702606:+ 0.67 6.83 9.19E-9 Box Plot
ACC rs202022064 chr7:64427810 A/G INTS4L1 chr7:64601603-64694600:+ 0.71 5.22 3.18E-6 Box Plot
ACC rs2041186 chr14:74282037 G/A LIN52 chr14:74551499-74667938:+ 0.48 5.51 1.14E-6 Box Plot
ACC rs2047287 chr1:213063767 A/G LQK1 chr1:213029947-213031480:- 0.85 10.18 5.53E-14 Box Plot
ACC rs2050632 chr1:245159567 A/G EFCAB2 chr1:245133007-245290466:+ 0.61 5.23 3.09E-6 Box Plot
ACC rs2055785 chr2:132310748 A/G LOC150776 chr2:132250386-132279149:+ 0.47 5.59 8.54E-7 Box Plot
ACC rs2056161 chr20:44368763 G/T WFDC3 chr20:44376583-44420571:- 0.82 5.79 4.09E-7 Box Plot
ACC rs2059817 chr19:52882285 G/A ZNF880 chr19:52873170-52889048:+ 0.8 7.19 2.48E-9 Box Plot
ACC rs2059818 chr19:52882520 T/C ZNF880 chr19:52873170-52889048:+ 0.77 6.87 8.04E-9 Box Plot
ACC rs2062971 chr19:52881854 C/G ZNF880 chr19:52873170-52889048:+ 0.77 6.87 8.04E-9 Box Plot
ACC rs2064504 chr20:44403710 A/G WFDC3 chr20:44376583-44420571:- 0.95 7.04 4.32E-9 Box Plot
ACC rs2070688 chr8:145151910 C/T FAM83H chr8:144806103-144815971:- 1.1 5.34 2.05E-6 Box Plot